Home    Personal    Work    Computers    Miscellaneous

Cell signalling networks, literature

The following is a list of papers I'm researching. The list is mainly used for my own administration, but you can have a look at the stuff I'm currently looking into.

Papers of which we have a copy

\article{Dittrich2001, author = {Dittrich, P. and Ziegler, J. and Banzhaf, W.}, title = {Artificial Chemistries--A Review}, journal = {Artificial Life}, year = {2001}, volume = {7}, pages = {225--275} }

\article{Ebenhoh2001, author = {Ebenhoh, O. and Heinrich, R.}, title = {Evolutionary Optimization of Metabolic Pathways. Theoretical Reconstruction of the Stoichiometry of ATP and NADH Producing Systems}, journal = {Bull. Math. Biol.}, year = {2001}, volume = {63}, pages = {21-55} }

\article{Heinrich1999, author = {Heinrich, R. and Mel\'endez-Hevia, E. and Montero, F. and Nu\~no, J. C. and Stephani, A. and Waddell, T. G.}, title = {The Structural Design of Glycolysis; An Evolutionary Approach}, journal = {Biochem. Soc. Trans.}, year = {1999}, volume = {27}, pages = {294--298} }

\article{MelendezHevia1990, author = {Mel\'endez-Hevia, E.}, title = {The Game of the Pentose Phosphate Cycle: A Mathematical Approach to Study the Optimization in Design of Metabolic Pathways During Evolution}, journal = {Biomed. Biochim. Acta}, year = {1990}, volume = {49}, pages = {903--916} }

\article{MelendezHevia1994, author = {Mel\'endez-Hevia, E. and Waddell, T. G. and Montero, F.}, title = {Optimization of Metabolism: The Evoluytion of Metabolic Pathways toward Simplicity through the Game of the Pentose Phosphate Cycle}, journal = {J. theor. Biol.}, year = {1994}, volume = {166}, pages = {201--220} }

\article{MelendezHevia1996, author = {Mel\'endez-Hevia, E. and Waddell, T. G. and Cascante, M.}, title = {The Puzzle of the Krebs Citric Acid Cycle: Assembling the Pieces of Chemically Feasible Reactions, and Opportunism in the Design of Metabolic Pathways during Evolution}, journal = {J. mol. Evol.}, year = {1996}, volume = {43}, pages = {293--303} }

\article{MelendezHevia1997, author = {Mel\'endez-Hevia, E. and Waddell, T. G. and Heinrich, R. and Montero, F.}, title = {Theoretical Approaches to the Evolutionary Optimization of Glycolysis. Chemical Analysis}, journal = {Eur. J. Biochem.}, year = {1997}, volume = {244}, pages = {527--543} }

\article{Mittenthal2001 author = {Mittenthal, Jay E. and Clarke, Bertrand and Waddell, Thomas G. and Fawcett, Glenn}, title = {A New Method for Assembling Metabolic Networks, with Application to the Krebs Citric Acid Cycle}, journal = {J. theor. Biol.}, year = {2001}, volume = {208}, pages = {361--382} }

\proceedings{Mittenthal1996, author = {Mittenthal, J. E.}, title = {An Algorithm to Assemble Pathways from Processes}, book = {Pacific Symposium on Biocomputing '97}, editor = {Altman, R. B. and Dunker, A. K. and Hunter, L. and Klein, T.E.}, year = {1996}, pages = {292--303}, publisher = {World Scientific} }

\article{Mittenthal1998, author = {Mittenthal, J. E. and Tuan, A. and Clarke, B. and Scheeline, A.}, title = {Designing Metabolism: Alternative Connectivities for The Pentose Phosphate Pathway}, journal = {Bull. Math. Biol.}, year = {1998}, volume = {60}, pages = {815--856} }

\article{Morowitz1999, author = {Morowitz, H.}, title = {A Theory of Biochemical Organization, Metabolic Pathways, and Evolution}, journal = {Complexity}, year = {1999}, volume = {4}, pages = {39--53} }

\article{Ziegler2001, author = {Ziegler, J. and Banzhaf, W.}, title = {Evolving Control Metabolisms for a Robot}, journal = {Artificial Life}, year = {2001}, volume = {7}, pages = {171-190} }

Papers that have been ordered from the library

\article{Baldwin1981, author = {Baldwin, J. E. and Krebs, H.}, title = {The Evolution of Metabolic Cycles}, journal = {Nature}, year = {1981}, volume = {291}, pages = {381--382} }

\article{Bray1995, author = {Bray, D.}, title = {Protein Molecules as Computational Elements in Living Cells}, journal = {Nature}, year = {1995}, volume = {376}, pages = {307--313} }

\article{Mavrovouniotis1990, author = {Mavrovouniotis, M. L. and Stephanopoulos, G.}, title = {Computer-Aided Synthesis of Biochemical Pathways}, journal = {Biotechnol. Bioeng.}, year = {1990}, volume = {36}, pages = {1119-1132} }

Papers that need to be searched for, and ordered if necessary

bibtex template for my convenience

\article{, author = {}, title = {}, journal = {}, year = {}, volume = {}, pages = {} }

Edit (locked) - History - Recent Changes - Search - Statistics
All contents copyrighted 2000-2006 Anthony Liekens unless otherwise noted. Powered by PmWiki
Page last modified on October 14, 2005, at 01:45 PM.